#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2break 3 4 5 6 71-41-72-32-52-64-6
1 IL_2QBZ_0012QBZ0.00001XM-Box RNA, ykoK riboswitch aptamerC21G22*C163G164A165U167G168cWWcWW
2 IL_1S72_0911S721.17681C-loop (H)0 LSU rRNAA2761G2763*C2717C2718A2719C2720U2721tHWcWWcWWcSWcSH
3 IL_3F1H_1013F1H1.35451A23S RRNAA2725G2727*C2680C2681U2682C2683U2684ntHHcWWcWWtSHcSW
4 IL_1S72_0511S721.27011C-loop (H)0 LSU rRNAA1437C1439*G1425C1426A1427C1428U1429tHWcWWcWWcSWcSH

3D structures

Complete motif including flanking bases
SequenceCounts
CG*CGAUUG1
ACG*CCACU1
CCUCU*AUG1
AGC*GCACU1
Non-Watson-Crick part of the motif
SequenceCounts
*GAUU1
C*CAC1
CUC*U1
G*CAC1
Annotations
  • C-loop (H) (2)
  • (2)
  • Basepair signature
    Heat map statistics
    Min 0.30 | Avg 0.64 | Max 1.35
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