Motif IL_53988.1 Version IL_53988.1 of this group appears in releases 0.5 to 1.15

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3		4		5		6		7	break		8		9		10		11		12	1-12	2-11	3-4	5-10	6-9	7-8
1	IL_2QBG_014	2QBG	0	1		B	23S rRNA	C	274	C	275	U	276	A	278	A	279	U	280	C	281	*	G	359	U	360	G	361	A	362	G	363	cWW	ntSH	ncSH	tHS	ncWS	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CCUGAAUC*GUGAG	1

Non-Watson-Crick part of the motif

Sequence	Counts
CUGAAU*UGA	1

Release history

Release	0.5	0.6	0.7	0.8	0.9	0.10	0.11	0.12	1.0	1.1	1.2	1.3	1.4	1.5	1.6	1.7	1.8	1.9	1.10	1.11	1.12	1.13	1.14	1.15
Date	2011-12-08	2012-04-02	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04	2013-04-08	2013-05-04	2013-06-01	2013-07-01	2013-08-03	2013-08-31	2013-09-28	2013-11-05	2013-12-07	2014-01-04	2014-02-01	2014-03-01	2014-03-29	2014-04-27	2014-06-20
Status	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motif	Common motif instances	Only in IL_53988.1	Only in the child motif
IL_68945.1 Compare	IL_2QBG_014		IL_1VWW_115

Annotations
Basepair signature: cWW-cSW-L-L-tHS-cWS-cWW
Heat map statistics: Min 0.00 | Avg 0.00 | Max 0.00

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Coloring options: Nucleotide numbers

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