Motif IL_54678.3 Version IL_54678.3 of this group appears in releases 3.62 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3WBM_004 | 3WBM | 0.8015 | 1 | Other IL | X+Y | RNA (25-MER) | U | 23 | C | 24 | * | G | 2 | A | 4 | cWW | cWW |
| 2 | IL_4V9F_073 | 4V9F | 0.0000 | 3 | 0 | LSU rRNA | A | 2095 | G | 2097 | * | C | 2647 | U | 2650 | cWW | cWW | |
| 3 | IL_4WF9_079 | 4WF9 | 0.1410 | 3 | X | LSU rRNA | A | 2081 | G | 2083 | * | C | 2639 | U | 2642 | cWW | cWW | |
| 4 | IL_5J7L_321 | 5J7L | 0.1457 | 3 | DA | LSU rRNA | A | 2054 | G | 2056 | * | C | 2612 | U | 2615 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACG*CUAU | 2 |
| UC*GUA | 1 |
| AAG*CUAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| C*UA | 2 |
| *U | 1 |
| A*UA | 1 |
Release history
| Release | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Other IL (1)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.14 | Avg 0.37 | Max 0.89
Coloring options: