#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 11 121-122-115-86-7
1 IL_4W90_0024W900.09580C cyclic di-AMP riboswitchG28G29A30C31C32C33*G101C102U103A104A105C106cWWtSHcBWcWW
2 IL_4QK9_0014QK90.00000AC-di-AMP riboswitchG29G30A31C32C33C34*G98C99U100A101A102C103cWWtSHncBWcWW
3 IL_4QLM_0024QLM0.11360A cyclic di-AMP riboswitchG27G28A29C30C31C32*G96C97U98A99A100C101cWWtSHncBWcWW
4 IL_6N5P_0016N5P0.12960A cyclic di-AMP riboswitchG31G32A33A34C35C36*G99C100U101A102A103C104cWWtSHncBWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGACCC*GCUAAC3
GGAACC*GCUAAC1
Non-Watson-Crick part of the motif
SequenceCounts
GACC*CUAA3
GAAC*CUAA1

Release history

Release3.773.783.793.803.813.823.833.843.853.863.873.88
Date2023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-11
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-tSH-tHS-R-L-L-R-cWW
    Heat map statistics
    Min 0.10 | Avg 0.09 | Max 0.16
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