Motif IL_57193.1 Version IL_57193.1 of this group appears in releases 0.4 to 0.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 3-10 | 4-9 | 5-8 | 6-7 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1FJG_053 | 1FJG | 0.0000 | 0 | A | SSU rRNA | C | 1303 | G | 1304 | G | 1305 | A | 1306 | U | 1307 | U | 1308 | * | A | 1329 | U | 1330 | G | 1331 | A | 1332 | A | 1333 | G | 1334 | cWW | tSH | tSH | tHS | cWw | cWW |
| 2 | IL_2ZJR_026 | 2ZJR | 0.8145 | 0 | X | LSU rRNA | C | 927 | G | 928 | A | 929 | A | 930 | G | 931 | G | 932 | * | C | 870 | U | 871 | G | 872 | U | 873 | A | 874 | G | 875 | cWW | tSH | ntHW | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGGAUU*AUGAAG | 1 |
| CGAAGG*CUGUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGAU*UGAA | 1 |
| GAAG*UGUA | 1 |
Release history
| Release | 0.4 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 2 parents |
Parent motifs
| Parent motif | Common motif instances | Only in IL_57193.1 | Only in the parent motif |
|---|---|---|---|
| IL_15373.1 Compare | IL_1FJG_053 | IL_2ZJR_026 | IL_3B5F_001 |
| IL_78493.1 Compare | IL_2ZJR_026 | IL_1FJG_053 | IL_1S72_063, IL_2ZJR_064 |
Children motifs
| Child motif | Common motif instances | Only in IL_57193.1 | Only in the child motif |
|---|---|---|---|
| IL_34435.1 Compare | IL_1FJG_053 | IL_2ZJR_026 | IL_2XZM_080, IL_2AW7_059 |
| IL_50881.1 Compare | IL_2ZJR_026 | IL_1FJG_053 |
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