Motif IL_57785.2 Version IL_57785.2 of this group appears in releases 0.3 to 0.4
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_2FQN_003 | 2FQN | 0.0000 | 1 | A+B | RNA (23-mer) | A | 15 | A | 17 | A | 18 | G | 19 | * | C | 30 | G | 31 | C | 32 | U | 33 | cWW | cSW | cWW | |
2 | IL_2OE5_002 | 2OE5 | 0.0955 | 1 | B+A | RNA (17-mer) | A | 1490 | A | 1492 | A | 1493 | G | 1494 | * | C | 1407 | G | 1408 | C | 1409 | U | 1410 | cWW | cSW | cWW | |
3 | IL_3F1H_044 | 3F1H | 1.2024 | 1 | A | 23S RRNA | U | 1240 | A | 1241 | A | 1242 | G | 1243 | * | C | 1202 | G | 1203 | A | 1204 | G | 1206 | cWW | tHS | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
AAAAG*CGCU | 2 |
CGAUG*UAAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AAA*GC | 2 |
GAU*AA | 1 |
Release history
Parent motifs
Parent motif | Common motif instances | Only in IL_57785.2 | Only in the parent motif |
---|---|---|---|
IL_57785.1 Compare | IL_2FQN_003, IL_2OE5_002 | IL_3F1H_044 | |
IL_01643.1 Compare | IL_3F1H_044 | IL_2FQN_003, IL_2OE5_002 | IL_2ZJR_057, IL_3BNP_003, IL_3BNP_002, IL_1SAQ_002, IL_1FJG_059, IL_3D0U_002, IL_2ZJR_082, IL_1SA9_002, IL_1SA9_001, IL_1S72_098, IL_3BNQ_011, IL_3BNQ_005 |
Children motifs
Child motif | Common motif instances | Only in IL_57785.2 | Only in the child motif |
---|---|---|---|
IL_57785.3 Compare | IL_2FQN_003, IL_2OE5_002 | IL_3F1H_044 |
Coloring options: