#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 7 81-82-73-64-5
1 IL_2FQN_0032FQN0.00001A+BRNA (23-mer)A15A17A18G19*C30G31C32U33cWWcSWcWW
2 IL_2OE5_0022OE50.09551B+ARNA (17-mer)A1490A1492A1493G1494*C1407G1408C1409U1410cWWcSWcWW
3 IL_3F1H_0443F1H1.20241A23S RRNAU1240A1241A1242G1243*C1202G1203A1204G1206cWWtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
AAAAG*CGCU2
CGAUG*UAAG1
Non-Watson-Crick part of the motif
SequenceCounts
AAA*GC2
GAU*AA1

Release history

Release0.30.4
Date2011-12-082011-12-08
StatusUpdated, 2 parentsExact match

Parent motifs

Children motifs

Child motifCommon motif instancesOnly in IL_57785.2Only in the child motif
IL_57785.3
Compare
IL_2FQN_003, IL_2OE5_002IL_3F1H_044
Annotations
  • (3)
  • Basepair signature
    Heat map statistics
    Min 0.10 | Avg 0.55 | Max 1.20
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