#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 7 8 9 10 11 12 13 141-142-93-124-56-108-14
1 IL_3D2V_0023D2V0.00001ATPP riboswitch (THI element)G10G11U12G13*C26U27G28A29G30A31A32A33G34C36cWWtSScWHcWWtWHcsS
2 IL_3D2V_0053D2V0.04601BTPP riboswitch (THI element)G10G11U12G13*C26U27G28A29G30A31A32A33G34C36cWWtSScWHcWWtWHcsS

3D structures

Complete motif including flanking bases
SequenceCounts
GGUG*CUGAGAAAGUC2
Non-Watson-Crick part of the motif
SequenceCounts
GU*UGAGAAAGU2

Release history

Release0.10.20.30.40.50.6
Date2011-12-082011-12-082011-12-082011-12-082011-12-082012-04-02
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in IL_57870.1Only in the child motif
IL_27243.1
Compare
IL_3D2V_002IL_3D2V_005
Annotations
  • (2)
  • Basepair signature
    14_cWW-tSS,cWH-cWH-cWW--tWH--cSS
    Heat map statistics
    Min 0.05 | Avg 0.02 | Max 0.05
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