Motif IL_59877.1 Version IL_59877.1 of this group appears in releases 3.89 to 3.96
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 1-3 | 1-5 | 3-4 | 4-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5Y58_001 | 5Y58 | 0.0000 | 1 | X | TLC1 | U | 291 | A | 292 | A | 294 | * | U | 308 | G | 309 | cWW | cWW | |||
| 2 | IL_1XJR_004 | 1XJR | 0.6340 | 1 | 180 degree turn | A | s2m RNA | G | 28 | A | 29 | C | 31 | * | G | 19 | C | 20 | ncsS | cWW | cWW | ncsS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAUA*UG | 1 |
| GAUC*GC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AU* | 2 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- 180 degree turn (1)
- (1)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.63 | Avg 0.32 | Max 0.63
Coloring options: