Motif IL_61249.1 Version IL_61249.1 of this group appears in releases 3.88 to 3.89
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 1-20 | 2-19 | 4-17 | 5-16 | 6-15 | 7-14 | 8-13 | 9-12 | 10-11 | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_5J7L_387 | 5J7L | 0.0000 | 0 | DA | LSU rRNA | U | 1851 | U | 1852 | A | 1853 | A | 1854 | U | 1855 | U | 1856 | G | 1857 | A | 1858 | U | 1859 | G | 1860 | * | U | 1882 | U | 1883 | G | 1884 | A | 1885 | U | 1886 | C | 1887 | G | 1888 | A | 1889 | A | 1890 | G | 1891 | cWW | ntSH | tHS | cWW | cwW | tSH | tHS | cWw | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UUAAUUGAUG*UUGAUCGAAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UAAUUGAU*UGAUCGAA | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: