Motif IL_61341.1 Version IL_61341.1 of this group appears in releases 3.96 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 2-5 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8CRE_441 | 8CRE | 0.0000 | 1 | Isolated cWH basepair (H) | CM | SSU rRNA | U | 1036 | U | 1037 | U | 1039 | * | A | 1050 | C | 1051 | G | 1052 | ncWW | cHW | cWW |
| 2 | IL_3OXE_002 | 3OXE | 0.9707 | 2 | A | domain II of glycine riboswitch | C | 31 | G | 32 | G | 35 | * | C | 70 | A | 71 | G | 72 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUGU*ACG | 1 |
| CGAAG*CAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UG*C | 1 |
| GAA*A | 1 |
- Annotations
-
- (1)
- Isolated cWH basepair (H) (1)
- Basepair signature
- cWW-L-R-L-cWW
- Heat map statistics
- Min 0.97 | Avg 0.49 | Max 0.97
Coloring options: