Motif IL_61438.4 Version IL_61438.4 of this group appears in releases 3.96 to 3.96
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_056 | 4LFB | 0.2054 | 2 | A | SSU rRNA | C | 1501 | A | 1502 | G | 1504 | * | C | 1399 | G | 1401 | cWW | cWW |
| 2 | IL_8P9A_452 | 8P9A | 0.0000 | 2 | sR | SSU rRNA | C | 1764 | A | 1765 | G | 1767 | * | C | 1636 | G | 1638 | cWW | cWW |
| 3 | IL_8CRE_466 | 8CRE | 0.0705 | 2 | CM | SSU rRNA | C | 1751 | A | 1752 | G | 1754 | * | C | 1623 | G | 1625 | cWW | cWW |
| 4 | IL_5J7L_058 | 5J7L | 0.0973 | 2 | AA | SSU rRNA | C | 1501 | A | 1502 | G | 1504 | * | C | 1399 | G | 1401 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAG*CCG | 3 |
| CAAG*C(5MC)G | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA*C | 3 |
| AA*(5MC) | 1 |
Release history
| Release | 3.96 |
|---|---|
| Date | 2025-04-23 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.07 | Avg 0.12 | Max 0.23
Coloring options: