Motif IL_62499.1 Version IL_62499.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-3 | 1-7 | 3-4 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1FJG_050 | 1FJG | 0.0000 | 3 | 180 degree turn (H) | A | SSU rRNA | G | 1255 | A | 1256 | G | 1258 | * | C | 1277 | U | 1278 | A | 1279 | C | 1282 | cSs | cWW | cWW |
| 2 | IL_2AW7_057 | 2AW7 | 0.5149 | 3 | A | SSU rRNA | G | 1255 | A | 1256 | G | 1258 | * | C | 1277 | G | 1278 | G | 1279 | C | 1282 | cSs | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUG*CUAAUC | 1 |
| GAAG*CGGACC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AU*UAAU | 1 |
| AA*GGAC | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_62499.1 | Only in the parent motif |
|---|---|---|---|
| IL_20796.3 Compare | IL_1FJG_050 | IL_2AW7_057 | IL_1XJR_004 |
Children motifs
| Child motif | Common motif instances | Only in IL_62499.1 | Only in the child motif |
|---|---|---|---|
| IL_62499.2 Compare | IL_2AW7_057, IL_1FJG_050 | IL_1XJR_004 |
- Annotations
-
- 180 degree turn (H) (1)
- (1)
- Basepair signature
- Heat map statistics
- Min 0.51 | Avg 0.26 | Max 0.51
Coloring options: