#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5break 6 7 8 9 10 111-112-103-94-75-68-9
1 IL_1FJG_0181FJG0.000006x5 Sarcin-Ricin; G-bulge (H)A SSU rRNAG446G447A448C449G450*C483G484G485U486A487C488cWWtSHtHWcWWcSH
2 IL_3G78_0133G780.40240AGroup II catalytic intron D1-D4-1G316G317A318A319G320*U298A299G300U301A302C303cWWtSHtHWtHHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGACG*CGGUAC1
GGAAG*UAGUAC1
Non-Watson-Crick part of the motif
SequenceCounts
GAC*GGUA1
GAA*AGUA1

Release history

Release0.10.20.30.40.50.6
Date2011-12-082011-12-082011-12-082011-12-082011-12-082012-04-02
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in IL_62718.1Only in the child motif
IL_41849.1
Compare
IL_3G78_013IL_1FJG_018
IL_87548.1
Compare
IL_1FJG_018IL_3G78_013IL_2QBG_067
Annotations
  • 6x5 Sarcin-Ricin; G-bulge (H) (1)
  • (1)
  • Basepair signature
    11_cWW-tSH-tHW-tHH-cWW---cSH
    Heat map statistics
    Min 0.40 | Avg 0.20 | Max 0.40
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