Motif IL_64048.1 Version IL_64048.1 of this group appears in releases 3.89 to 4.9
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 1-12 | 5-9 | 10-11 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4MGN_002 | 4MGN | 0.0000 | 0 | A | glyQS T box riboswitch | C | 37 | C | 38 | G | 39 | A | 40 | A | 41 | G | 42 | C | 43 | G | 44 | A | 45 | G | 46 | * | U | 68 | G | 69 | cWW | ntWH | cWW |
| 2 | IL_4JRC_004 | 4JRC | 0.2573 | 0 | B | Distal Stem I region of the glyQS T box leader RNA | C | 37 | C | 38 | G | 39 | A | 40 | A | 41 | G | 42 | C | 43 | G | 44 | A | 45 | G | 46 | * | U | 68 | G | 69 | cWW | tWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCGAAGCGAG*UG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGAAGCGA* | 2 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 | 4.8 | 4.9 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 | 2026-03-25 | 2026-04-22 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-cWW-L-L-tWH-R-L-R
- Heat map statistics
- Min 0.26 | Avg 0.13 | Max 0.26
Coloring options: