#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8break 9 10 11 12 13 141-142-133-125-126-117-108-9
1 IL_6HCT_0016HCT0.15101Kink-turnA+BRNA (19-mer)C2C3G4A5G7A8A9U10*A13U14G15A16A17G18cWWcWWtsStSHtHSncWScWW
2 IL_6HCT_0036HCT0.00001Kink-turnE+FRNA (11-mer) + RNA (8-mer)C2C3G4A5G7A8A9U10*A13U14G15A16A17G18cWWcWWntsStSHtHScWW
3 IL_6HCT_0026HCT0.08671Kink-turnB+ARNA (19-mer)C2C3G4A5G7A8A9U10*A13U14G15A16A17G18cWWcWWntsStSHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CCGAUGAAU*AUGAAG3
Non-Watson-Crick part of the motif
SequenceCounts
CGAUGAA*UGAA3

Release history

Release3.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.89
Date2018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-09
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Kink-turn (3)
  • Basepair signature
    cWW-cWW-tSS-tSH-L-tHS-R-cWW-L
    Heat map statistics
    Min 0.09 | Avg 0.09 | Max 0.17
    Help

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