Motif IL_65718.4 Version IL_65718.4 of this group appears in releases 3.96 to 3.96
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-3 | 3-8 | 4-7 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_068 | 4LFB | 0.0929 | 0 | A | SSU rRNA | G | 1497 | UR3 | 1498 | A | 1499 | A | 1500 | C | 1501 | * | G | 1401 | 4OC | 1402 | C | 1403 | 5MC | 1404 | cWW | cSH | cWS | cWW | cWW |
| 2 | IL_8P9A_453 | 8P9A | 0.0000 | 0 | sR | SSU rRNA | G | 1760 | U | 1761 | A | 1762 | A | 1763 | C | 1764 | * | G | 1638 | C | 1639 | C | 1640 | C | 1641 | cWW | cSH | cWS | cWW | cWW |
| 3 | IL_8CRE_467 | 8CRE | 0.0591 | 0 | CM | SSU rRNA | G | 1747 | U | 1748 | A | 1749 | A | 1750 | C | 1751 | * | G | 1625 | C | 1626 | C | 1627 | C | 1628 | cWW | cSH | ncWS | cWW | cWW |
| 4 | IL_5J7L_059 | 5J7L | 0.0837 | 0 | AA | SSU rRNA | G | 1497 | UR3 | 1498 | A | 1499 | A | 1500 | C | 1501 | * | G | 1401 | 4OC | 1402 | C | 1403 | C | 1404 | cWW | cSH | cWS | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAAC*GCCC | 2 |
| G(UR3)AAC*G(4OC)C(5MC) | 1 |
| G(UR3)AAC*G(4OC)CC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| (UR3)AA*(4OC)C | 2 |
| UAA*CC | 2 |
Release history
| Release | 3.96 |
|---|---|
| Date | 2025-04-23 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Heat map statistics
- Min 0.06 | Avg 0.07 | Max 0.11
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