#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3break 4 5 61-63-4
1 IL_4M6D_0134M6D0.15380HaptamerG26A27G28*C39A40C41cWWcWW
2 IL_4M4O_0044M4O0.00000BRNA (59-MER)G26A27G28*C39A40C41cWWcWW
3 IL_3U5F_0123U5F0.93750618S rRNAU150G151U152*A162G163A164cWWcWW
4 IL_4JK0_0034JK00.94710BRNA (21-mer)C511||||4_555U512||||4_555G513||||4_555*C511U512G513cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAG*CAC2
UGU*AGA1
CUG*CUG1
Non-Watson-Crick part of the motif
SequenceCounts
A*A2
G*G1
U*U1
Annotations
  • (4)
  • Basepair signature
    cWW-L-R-cWW
    Heat map statistics
    Min 0.15 | Avg 0.54 | Max 0.98
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