Motif IL_66745.4 Version IL_66745.4 of this group appears in releases 3.33 to 3.55
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-8 | 2-9 | 3-8 | 3-9 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5BTM_001 | 5BTM | 0.8807 | 0 | Triple non-canonical cWW pairs | A | RNA (55-mer) | U | 10 | U | 11 | C | 12 | U | 13 | A | 14 | * | U | 42 | U | 43 | C | 44 | U | 45 | A | 46 | cWW | ncWW | cwW | ncWw | cwW | cWW | |
| 2 | IL_5TBW_121 | 5TBW | 0.8146 | 0 | 1 | LSU rRNA | C | 3162 | A | 3163 | C | 3164 | A | 3165 | C | 3166 | * | G | 3284 | C | 3285 | G | 3286 | U | 3287 | G | 3288 | ncWW | ncWW | ncWW | ncWWa | cWW | |||
| 3 | IL_3BNN_006 | 3BNN | 0.0000 | 1 | D+C | A site of human ribosome | G | 12 | A | 13 | C | 14 | A | 15 | G | 17 | * | C | 5 | A | 6 | C | 7 | C | 8 | C | 9 | cWW | cWWa | ncWB | cWW | ||||
| 4 | IL_3BNN_007 | 3BNN | 0.2009 | 1 | C+D | A site of human ribosome | G | 12 | A | 13 | C | 14 | A | 15 | G | 17 | * | C | 5 | A | 6 | C | 7 | C | 8 | C | 9 | cWW | ncWWa | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GACAAG*CACCC | 2 |
| UUCUA*UUCUA | 1 |
| CACAC*GCGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACAA*ACC | 2 |
| UCU*UCU | 1 |
| ACA*CGU | 1 |
Release history
| Release | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 | 2022-02-02 | 2022-03-02 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Triple non-canonical cWW pairs (1)
- Basepair signature
- cWW-cWW-L-R-cWW-cWW
- Heat map statistics
- Min 0.20 | Avg 0.51 | Max 0.98
Coloring options: