Motif IL_68574.4 Version IL_68574.4 of this group appears in releases 3.91 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3BNR_011 | 3BNR | 0.5992 | 1 | D+C | A site of human mitochondrial ribosome, chain three | C | 5 | A | 6 | C | 7 | C | 8 | * | G | 15 | C | 16 | A | 17 | G | 19 | cWW | cWW | ||
| 2 | IL_5J7L_299 | 5J7L | 0.0000 | 1 | DA | LSU rRNA | U | 1468 | A | 1469 | A | 1470 | G | 1471 | * | U | 1520 | G | 1521 | A | 1522 | G | 1524 | cWW | tHH | tHS | cWW |
| 3 | IL_9DFE_045 | 9DFE | 0.2965 | 1 | 1A | LSU rRNA | U | 1240 | A | 1241 | A | 1242 | G | 1243 | * | C | 1202 | G | 1203 | A | 1204 | G | 1206 | cWW | tHH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CACC*GCAAG | 1 |
| UAAG*UGAUG | 1 |
| UAAG*CGAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA*GAU | 2 |
| AC*CAA | 1 |
Release history
| Release | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|
| Date | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-tHH-tHS-cWW
- Heat map statistics
- Min 0.30 | Avg 0.35 | Max 0.69
Coloring options: