Motif IL_69181.1 Version IL_69181.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 5 | 1-5 | 2-3 | 2-4 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1X8W_004 | 1X8W | 0.7258 | 0 | A | Group I catalytic intron | A | 192 | C | 193 | * | G | 129 | U | 130 | U | 131 | cWW | cWW | ncSH | |
| 2 | IL_3J9M_089 | 3J9M | 0.0000 | 0 | AA | SSU rRNA | U | 1208 | C | 1209 | * | G | 1355 | A | 1356 | A | 1357 | cWW | cWW | ||
| 3 | IL_3J9M_097 | 3J9M | 0.4733 | 6 | AA | SSU rRNA | C | 1278 | C | 1279 | * | G | 1289 | A | 1296 | G | 1297 | cWW | cWW | tsS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AC*GUU | 1 |
| UC*GAA | 1 |
| CC*GCUACAAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *U | 1 |
| *A | 1 |
| *CUACAAA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-R-cWW
- Heat map statistics
- Min 0.47 | Avg 0.45 | Max 0.83
Coloring options: