Motif IL_69271.3 Version IL_69271.3 of this group appears in releases 3.96 to 4.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 8-9 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5BTP_005 | 5BTP | 0.0000 | 3 | B | ZMP/ZTP riboswitch | C | 15 | U | 16 | G | 17 | A | 18 | C | 19 | G | 20 | G | 21 | G | 25 | * | C | 38 | A | 39 | U | 40 | G | 41 | cWW | cwW | cWW |
| 2 | IL_9BZC_002 | 9BZC | 0.3303 | 2 | A | RNA (87-MER) | C | 12 | U | 13 | G | 14 | A | 15 | C | 16 | G | 17 | G | 18 | G | 21 | * | C | 33 | A | 34 | U | 35 | G | 36 | cWW | cwW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGACGGAACG*CAUG | 1 |
| CUGACGGAAG*CAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGACGGAAC*AU | 1 |
| UGACGGAA*AU | 1 |
Release history
| Release | 3.96 | 3.97 | 3.98 | 3.99 | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 | 4.8 | 4.9 | 4.10 | 4.11 | 4.12 | 4.13 | 4.14 | 4.15 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 | 2026-03-25 | 2026-04-22 | 2026-05-20 | 2026-06-17 | 2026-07-15 | 2026-08-12 | 2026-09-09 | 2026-10-07 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-L-R-L-cWW-L-L-R
- Heat map statistics
- Min 0.33 | Avg 0.17 | Max 0.33
Coloring options: