Motif IL_69440.3 Version IL_69440.3 of this group appears in releases 3.91 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 1-8 | 3-4 | 5-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4WF9_014 | 4WF9 | 0.2186 | 0 | X | LSU rRNA | C | 386 | G | 387 | A | 388 | A | 389 | A | 390 | * | U | 336 | A | 337 | G | 338 | cWW | cWW | |
| 2 | IL_5J7L_254 | 5J7L | 0.0000 | 0 | DA | LSU rRNA | C | 343 | A | 344 | A | 345 | A | 346 | A | 347 | * | U | 293 | A | 294 | G | 295 | cWW | cSH | cWW |
| 3 | IL_9DFE_011 | 9DFE | 0.1477 | 0 | 1A | LSU rRNA | C | 343 | G | 344 | A | 345 | A | 346 | A | 347 | * | U | 293 | A | 294 | G | 295 | cWW | cSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAAA*UAG | 2 |
| CAAAA*UAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAA*A | 2 |
| AAA*A | 1 |
Release history
| Release | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|
| Date | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-L-R-cSH-cWW
- Heat map statistics
- Min 0.15 | Avg 0.14 | Max 0.26
Coloring options: