#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3break 4 5 6 7 81-82-73-4
1 IL_2QBG_1032QBG0.00002B23S rRNAU2687G2688C2691*G2718G2719U2720A2721G2722cWWtSHcWW
2 IL_4IOA_0984IOA0.16922X LSU rRNAU2666C2667C2670*G2698G2699U2700A2701G2702cWWtSHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UGUUC*GGUAG1
UCUCC*GGUAG1
Non-Watson-Crick part of the motif
SequenceCounts
GUU*GUA1
CUC*GUA1

Release history

Release1.11.21.31.41.51.61.71.81.91.101.111.121.13
Date2013-04-082013-05-042013-06-012013-07-012013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-29
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_69536.1Only in the parent motif
IL_41397.2
Compare
IL_2QBG_103IL_4IOA_098IL_2ZJR_097

Children motifs

Child motifCommon motif instancesOnly in IL_69536.1Only in the child motif
IL_69536.2
Compare
IL_4IOA_098, IL_2QBG_103IL_4NVV_101
Annotations
  • (2)
  • Basepair signature
    cWW-tSH-R-R-cWW
    Heat map statistics
    Min 0.17 | Avg 0.08 | Max 0.17
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.0894 s