#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3break 4 5 6 7 81-82-73-4
1 IL_2QBG_1032QBG0.16392B23S rRNAU2687G2688C2691*G2718G2719U2720A2721G2722cWWtSHcWW
2 IL_4NVV_1014NVV0.00002A23S Ribosomal RNAU2699U2700C2703*G2731G2732U2733A2734G2735cWWtSHcWW
3 IL_4IOA_0984IOA0.15642X LSU rRNAU2666C2667C2670*G2698G2699U2700A2701G2702cWWtSHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UGUUC*GGUAG1
UUUCC*GGUAG1
UCUCC*GGUAG1
Non-Watson-Crick part of the motif
SequenceCounts
GUU*GUA1
UUC*GUA1
CUC*GUA1

Release history

Release1.14
Date2014-04-27
StatusUpdated, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_69536.2Only in the parent motif
IL_69536.1
Compare
IL_4IOA_098, IL_2QBG_103IL_4NVV_101

Children motifs

Child motifCommon motif instancesOnly in IL_69536.2Only in the child motif
IL_69536.3
Compare
IL_4NVV_101, IL_2QBG_103, IL_4IOA_098IL_4CUX_084
Annotations
  • (3)
  • Basepair signature
    cWW-tSH-R-R-cWW
    Heat map statistics
    Min 0.16 | Avg 0.11 | Max 0.17
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