Motif IL_69901.1 Version IL_69901.1 of this group appears in releases 0.10 to 0.12
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 1-5 | 2-3 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2XZM_026 | 2XZM | 0.0000 | 0 | A | 18S RRNA | G | 477 | G | 478 | * | U | 493 | A | 494 | C | 495 | cWW | ncWW | ntSH |
| 2 | IL_3U5H_107 | 3U5H | 0.9908 | 1 | 5 | 25S rRNA | G | 2787 | C | 2788 | * | G | 2770 | U | 2771 | C | 2773 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GG*UAC | 1 |
| GC*GUCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *A | 1 |
| *UC | 1 |
Release history
| Release | 0.10 | 0.11 | 0.12 |
|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 |
| Status | New id, 2 parents | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_69901.1 | Only in the parent motif |
|---|---|---|---|
| IL_12068.1 Compare | IL_2XZM_026 | IL_3U5H_107 | IL_3G78_005 |
| IL_80179.2 Compare | IL_3U5H_107 | IL_2XZM_026 | IL_3G78_012, IL_4A1B_069, IL_2XZM_053, IL_1FJG_012 |
Children motifs
| Child motif | Common motif instances | Only in IL_69901.1 | Only in the child motif |
|---|---|---|---|
| IL_03914.1 Compare | IL_2XZM_026 | IL_3U5H_107 | |
| IL_27892.1 Compare | IL_3U5H_107 | IL_2XZM_026 | IL_2XZM_053 |
- Annotations
-
- (2)
- Basepair signature
- cWW-R-cWW
- Heat map statistics
- Min 0.99 | Avg 0.50 | Max 0.99
Coloring options: