Motif IL_74317.1 Version IL_74317.1 of this group appears in releases 4.0 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4WF9_054 | 4WF9 | 0.2967 | 1 | Other IL | X | LSU rRNA | C | 1624 | U | 1625 | A | 1626 | G | 1627 | * | C | 1461 | G | 1462 | A | 1463 | G | 1465 | cWW | cWW | ||
| 2 | IL_7A0S_053 | 7A0S | 0.2265 | 1 | tSH-tHW | X | LSU rRNA | C | 1451 | U | 1452 | A | 1453 | U | 1454 | * | A | 1567 | A | 1568 | A | 1569 | G | 1571 | cWW | tWH | tHS | cWW |
| 3 | IL_8B0X_116 | 8B0X | 0.1496 | 1 | tSH-tHW (H) | a | LSU rRNA | C | 1439 | U | 1440 | A | 1441 | U | 1442 | * | A | 1553 | A | 1554 | A | 1555 | G | 1557 | cWW | tWH | tHS | cWW |
| 4 | IL_9E6Q_057 | 9E6Q | 0.0000 | 1 | 1 | LSU rRNA | A | 1586 | U | 1587 | A | 1588 | G | 1589 | * | C | 1694 | G | 1695 | A | 1696 | U | 1698 | cWW | tWH | tHS | cWW | |
| 5 | IL_9DFE_056 | 9DFE | 0.0937 | 1 | 1A | LSU rRNA | C | 1437 | U | 1438 | A | 1439 | G | 1440 | * | C | 1551 | G | 1552 | A | 1553 | G | 1555 | cWW | tWH | tHS | cWW | |
| 6 | IL_9DFE_009 | 9DFE | 0.1398 | 1 | 1A | LSU rRNA | A | 357 | U | 358 | A | 359 | G | 360 | * | C | 280 | G | 281 | A | 282 | U | 284 | cWW | tWH | tHS | cWW | |
| 7 | IL_2ZY6_001 | 2ZY6 | 0.1982 | 1 | tSH-tHW | A | phenylalanyl transfer RNA | A | 7 | U | 8 | A | 9 | G | 10 | * | C | 25 | G | 26 | A | 27 | U | 29 | cWW | tWH | ntHS | cWW |
| 8 | IL_9E6Q_056 | 9E6Q | 0.3552 | 1 | 1 | LSU rRNA | G | 1543 | U | 1544 | A | 1545 | G | 1546 | * | C | 1728 | G | 1729 | A | 1730 | C | 1732 | cWW | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAG*CGAUG | 1 |
| CUAU*AAACG | 1 |
| CUAU*AAAUG | 1 |
| AUAG*CGACU | 1 |
| CUAG*CGAAG | 1 |
| AUAG*CGAAU | 1 |
| AUAG*CGAGU | 1 |
| GUAG*CGAGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UA*GAA | 2 |
| UA*GAG | 2 |
| UA*GAU | 1 |
| UA*AAC | 1 |
| UA*AAU | 1 |
| UA*GAC | 1 |
Release history
| Release | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 |
|---|---|---|---|---|---|---|---|
| Date | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- tSH-tHW (2)
- Other IL (1)
- tSH-tHW (H) (1)
- Basepair signature
- cWW-tWH-tHS-cWW
- Heat map statistics
- Min 0.09 | Avg 0.22 | Max 0.46
Coloring options: