Motif IL_75294.1 Version IL_75294.1 of this group appears in releases 3.95 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5WTI_001 | 5WTI | 0.0000 | 1 | Other IL | B | RNA (123-MER) | G | 0 | C | 1 | A | 3 | G | 4 | G | 5 | * | C | 25 | A | 26 | A | 27 | C | 28 | cWW | ncWW | cWW |
| 2 | IL_9DFE_108 | 9DFE | 0.6150 | 0 | 1A | LSU rRNA | C | 2870 | C | 2871 | G | 2872 | A | 2873 | C | 2874 | * | G | 2843 | G | 2844 | G | 2845 | G | 2846 | cWW | cSW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCGAGG*CAAC | 1 |
| CCGAC*GGGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGAG*AA | 1 |
| CGA*GG | 1 |
- Annotations
-
- Other IL (1)
- (1)
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.62 | Avg 0.31 | Max 0.62
Coloring options: