Motif IL_76095.3 Version IL_76095.3 of this group appears in releases 0.7 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 1-18 | 2-17 | 3-16 | 4-14 | 5-13 | 8-11 | 9-10 | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1M5O_005 | 1M5O | 0.0000 | 2 | E | RNA HAIRPIN RIBOZYME | G | 19 | A | 20 | G | 21 | A | 22 | A | 23 | A | 24 | C | 25 | A | 26 | C | 27 | * | G | 54 | G | 55 | A | 57 | A | 59 | U | 60 | U | 61 | A | 62 | C | 63 | C | 64 | cWW | cWWa | tSH | tHW | tHW | cWW | cWW | |
| 2 | IL_2P7D_001 | 2P7D | 0.0824 | 2 | C+D | Ribozyme strand II + Ribozyme strand III | G | 19 | A | 20 | G | 21 | A | 22 | A | 23 | A | 24 | C | 25 | A | 26 | C | 27 | * | G | 35 | G | 36 | A | 38 | A | 40 | U | 41 | U | 42 | A | 43 | C | 44 | C | 45 | cWW | cWWa | tSH | tHW | tHW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGAAACAC*GGUAUAUUACC | 1 |
| GAGAAACAC*GGUACAUUACC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGAAACA*GUAUAUUAC | 1 |
| AGAAACA*GUACAUUAC | 1 |
Release history
| Release | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 | 1.17 | 1.18 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-20 | 2014-09-04 | 2014-10-07 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_76095.3 | Only in the parent motif |
|---|---|---|---|
| IL_76095.2 Compare | IL_2P7D_001, IL_1M5O_005 | IL_1M5O_002 |
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-cWW-tSH-R-tHW-tHW-tWH-L-cWW-cWW
- Heat map statistics
- Min 0.08 | Avg 0.04 | Max 0.08
Coloring options: