Motif IL_76636.1 Version IL_76636.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 2-5 | 3-4 | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_5UNE_001 | 5UNE | 0.1761 | 0 | A+B | RNA (47-MER) | U | 7 | G | 8 | A | 9 | * | U | 39 | G | 40 | G | 41 | cWW | ncwW | cWW |
2 | IL_1SI3_001 | 1SI3 | 0.0000 | 0 | B | RNA (9-mer) | U | 403 | G | 404 | A | 405 | * | U | 403||||4_675 | G | 404||||4_675 | A | 405||||4_675 | cWW | cWW | |
3 | IL_1SI2_002 | 1SI2 | 0.0849 | 0 | B | RNA (9-mer) | U | 403||||4_675 | G | 404||||4_675 | A | 405||||4_675 | * | U | 403 | G | 404 | A | 405 | cWW | cWW | |
4 | IL_4V88_395 | 4V88 | 0.1528 | 0 | A6 | SSU rRNA | A | 162 | G | 163 | A | 164 | * | U | 150 | G | 151 | U | 152 | cWW | cWW | |
5 | IL_5UNE_009 | 5UNE | 0.2016 | 0 | A+B | RNA (47-MER) | U | 39 | G | 40 | G | 41 | * | U | 7 | G | 8 | A | 9 | cWW | ncWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGA*UGA | 2 |
UGA*UGG | 1 |
AGA*UGU | 1 |
UGG*UGA | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
G*G | 5 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (5)
- Basepair signature
- cWW-L-R-cWW
- Heat map statistics
- Min 0.08 | Avg 0.14 | Max 0.22
Coloring options: