1 IL_8P9A_450 8P9A 0.3990 0 Tandem non-canonical cWW pairs sR SSU rRNA C 1495 U 1496 U 1497 G 1498 * C 1509 U 1510 U 1511 G 1512 cWW cwW cWW
2 IL_7LYF_001 7LYF 0.3132 1 Isolated cWH basepair with non-canonical cWW A Dengue virus SLA A 90 G 91 U 93 C 94 * G 39 U 40 C 41 U 42 cWW ncHW ncwW cWW
3 IL_8P9A_411 8P9A 0.2965 0 Tandem non-canonical cWW pairs sR SSU rRNA C 726 U 727 U 728 G 729 * C 709 U 710 U 711 G 712 ncWW cwW cWw cWW
4 IL_5C5W_001 5C5W 0.2185 0 Tandem non-canonical cWW pairs A RNA (19-mer) C 15||||5_556 U 16||||5_556 A 17||||5_556 G 18||||5_556 * C 2 C 3 U 4 G 5 cWW cwW cWW cWW
5 IL_402D_001 402D 0.3013 0 Tandem non-canonical cWW pairs A+B RNA (8-mer) C 103 C 104 A 105 G 106 * C 111 C 112 A 113 G 114 cWW cWW cWW cWW
6 IL_8P9A_380 8P9A 0.2615 0 Tandem non-canonical cWW pairs sR SSU rRNA U 302 U 303 U 304 C 305 * G 109 U 110 U 111 A 112 cWW cwW cWw cWW
7 IL_8CRE_397 8CRE 0.2532 0 Tandem non-canonical cWW pairs CM SSU rRNA U 300 U 301 U 302 C 303 * G 109 U 110 U 111 A 112 cWW cwW cWw cWW
8 IL_8CRE_044 8CRE 0.2660 0 Tandem non-canonical cWW pairs 1 LSU rRNA U 1037 U 1038 C 1039 U 1040 * A 1002 U 1003 U 1004 A 1005 cWW cwW ncWS cWW
9 IL_8P9A_269 8P9A 0.2437 0 Tandem non-canonical cWW pairs AR LSU rRNA U 1041 U 1042 C 1043 U 1044 * A 1006 U 1007 U 1008 A 1009 cWW cwW cWW
10 IL_8P9A_462 8P9A 0.2261 0 Tandem non-canonical cWW pairs sR SSU rRNA C 1675 U 1676 C 1677 A 1678 * U 1723 U 1724 U 1725 G 1726 cWW cwW cWW
11 IL_8UIW_002 8UIW 0.2213 0 Tandem non-canonical cWW pairs N azaaromatic riboswitch aptamer (yjdF RNA) G 112 U 113 C 114 G 115 * C 100 U 101 U 102 C 103 cWW cwW cWW
12 IL_8HNT_001 8HNT 0.2426 0 Tandem non-canonical cWW pairs B sgRNA C 32 U 33 C 34 C 35 * G 54 U 55 U 56 G 57 cWW cwW ncWS cWW
13 IL_6JDV_001 6JDV 0.2221 0 Tandem non-canonical cWW pairs B CRISPR RNA direct repeat element C 32 U 33 C 34 C 35 * G 66 U 67 U 68 G 69 cWW cwW ncWS cWW
14 IL_4UYK_003 4UYK 0.1412 0 Tandem non-canonical cWW pairs R SRP RNA G 81 U 82 U 83 C 84 * G 117 U 118 U 119 C 120 cWW cwW cWw cWW
15 IL_280D_001 280D 0.1722 0 Tandem non-canonical cWW pairs B+A RNA (12-mer) C 17 U 18 U 19 G 20 * C 5 U 6 U 7 G 8 cWW cwW cWw cWW
16 IL_8CRE_134 8CRE 0.1552 0 Tandem non-canonical cWW pairs 1 LSU rRNA U 3214 U 3215 U 3216 G 3217 * C 3200 U 3201 U 3202 A 3203 cWW cwW cWw cWW
17 IL_8CRE_060 8CRE 0.1316 0 Tandem non-canonical cWW pairs 1 LSU rRNA A 1339 U 1340 U 1341 G 1342 * C 1354 U 1355 U 1356 U 1357 cWW cwW cWw cWW
18 IL_8P9A_355 8P9A 0.1287 0 Tandem non-canonical cWW pairs AR LSU rRNA C 3235 U 3236 U 3237 G 3238 * C 3249 U 3250 U 3251 G 3252 cWW cwW cWw cWW
19 IL_6MWN_005 6MWN 0.1345 0 Tandem non-canonical cWW pairs B IRES A 643 U 644 U 645 G 646 * C 661 U 662 U 663 U 664 cWW cwW cWw cWW
20 IL_3R2D_002 3R2D 0.1301 0 Tandem non-canonical cWW pairs S+R RNA (12-mer) C 6 U 7 U 8 G 9 * C 6 U 7 U 8 G 9 cWW cwW cWw cWW
21 IL_8ID2_001 8ID2 0.0000 0 Tandem non-canonical cWW pairs C RNA (24-mer) A 5 C 6 U 7 G 8 * C 17 U 18 U 19 U 20 cWW ncWW cWW cWw cWW
22 IL_8CRE_475 8CRE 0.1358 0 Tandem non-canonical cWW pairs CM SSU rRNA G 1710 C 1711 U 1712 G 1713 * C 1662 U 1663 C 1664 C 1665 cWW ncWw cWw cWW
23 IL_4EYA_003 4EYA 0.2055 0 Tandem non-canonical cWW pairs f+e RNA (12-mer) C 6 U 7 U 8 G 9 * C 6 U 7 U 8 G 9 cWW cwW cWw cWW
24 IL_205D_001 205D 0.2708 0 Tandem non-canonical cWW pairs A+B RNA (12-mer) U 5 U 6 U 7 G 8 * U 17 U 18 U 19 G 20 cWW cwW cWw cWW
25 IL_7A0S_040 7A0S 0.2063 0 Tandem non-canonical cWW pairs X LSU rRNA A 1175 U 1176 U 1177 C 1178 * G 1196 U 1197 C 1198 U 1199 cWW cWW ncWw cWW
26 IL_3TZR_003 3TZR 0.2215 0 Tandem non-canonical cWW pairs A+B RNA (20-mer) + RNA (16-mer) C 62 U 63 U 64 C 65 * G 102 U 103 C 104 G 105 cWW cWW cWw cWW
27 IL_2PN3_004 2PN3 0.2375 0 Tandem non-canonical cWW pairs A+B RNA (24-mer) + RNA (20-mer) C 62 U 63 U 64 C 65 * G 102 U 103 C 104 G 105 cWW cWW cWw cWW
28 IL_8P9A_356 8P9A 0.1832 0 Tandem non-canonical cWW pairs AR LSU rRNA U 3300 U 3301 U 3302 G 3303 * C 3311 U 3312 U 3313 A 3314 cWW cwW cWw cWW
29 IL_8CRE_135 8CRE 0.2578 0 Tandem non-canonical cWW pairs 1 LSU rRNA C 3276 U 3277 U 3278 A 3279 * U 3265 U 3266 U 3267 G 3268 cWW cWw cWw cWW
30 IL_4XW0_002 4XW0 0.2987 0 Tandem non-canonical cWW pairs A+B RNA (10-mer) C 2 C 3 U 4 LCG 5 * C 2 C 3 U 4 LCG 5 cWW cWW cWW cWW
31 IL_4XW1_002 4XW1 0.2869 0 Tandem non-canonical cWW pairs C RNA (9-mer) C 2||||7_555 C 3||||7_555 U 4||||7_555 LCG 5||||7_555 * C 2 C 3 U 4 LCG 5 cWW cWW cWW cWW
32 IL_4K27_003 4K27 0.3739 0 Tandem non-canonical cWW pairs U Myotonic Dystrophy Type 2 RNA C 41 C 42 U 43 G 44 * C 12 C 13 U 14 G 15 cWW cWW cWW cWW
33 IL_4K27_002 4K27 0.4056 0 Tandem non-canonical cWW pairs U Myotonic Dystrophy Type 2 RNA C 45 C 46 U 47 G 48 * C 8 C 9 U 10 G 11 cWW cWW cWW cWW
34 IL_8X5V_001 8X5V 0.2957 0 Tandem non-canonical cWW pairs B RNA (110-mer) U 28 U 29 C 30 C 31 * G 40 U 41 U 42 G 43 cWW cwW cWW cWW
