Motif IL_81441.1 Version IL_81441.1 of this group appears in releases 0.6 to 1.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | break | 3 | 4 | 5 | 1-5 | 2-3 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2QBG_059 | 2QBG | 0.0000 | 1 | B | U | 1481 | G | 1482 | * | C | 1507 | A | 1508 | G | 1510 | cWW | cWW |
| 2 | IL_2ZJR_058 | 2ZJR | 0.7681 | 3 | X | C | 1497 | G | 1498 | * | C | 1522 | A | 1523 | G | 1527 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UG*CAAG | 1 |
| CG*CACAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AA | 1 |
| *ACAU | 1 |
Release history
| Release | 0.6 | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 |
|---|---|---|---|---|---|---|---|---|
| Date | 2012-04-02 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_81441.1 | Only in the parent motif |
|---|---|---|---|
| IL_39081.1 Compare | IL_2QBG_059 | IL_2ZJR_058 | IL_1NTB_004 |
| IL_50828.1 Compare | IL_2ZJR_058 | IL_2QBG_059 | IL_3PYO_050 |
Children motifs
| Child motif | Common motif instances | Only in IL_81441.1 | Only in the child motif |
|---|---|---|---|
| IL_28644.1 Compare | IL_2QBG_059 | IL_2ZJR_058 |
- Annotations
-
- (2)
- Basepair signature
- cWW-R-cWW
- Heat map statistics
- Min 0.77 | Avg 0.38 | Max 0.77
Coloring options: