#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 7 8 9 10 11 12 13 14 15 16 17 181-182-173-64-54-1710-1611-15
1 IL_1MZP_0031MZP0.00000Bfragment of 23S rRNAG20G21A22G23*C32G33C34C35G36G37U38G39A40A41A42U43A44C45cWWtSHntSscWWntsSntWHtWH
2 IL_3F1H_0833F1H0.30560A23S RRNAG2124G2125A2126G2127*C2161G2162C2163C2164G2165G2166U2167G2168A2169A2170A2171U2172A2173C2174cWWntSHntSscWWntsSntSH

3D structures

Complete motif including flanking bases
SequenceCounts
GGAG*CGCCGGUGAAAUAC2
Non-Watson-Crick part of the motif
SequenceCounts
GA*GCCGGUGAAAUA2

Release history

Release0.10.20.30.4
Date2011-12-082011-12-082011-12-082011-12-08
StatusNew id, no parentsExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in IL_83664.1Only in the child motif
IL_48650.1
Compare
IL_1MZP_003IL_3F1H_083
Annotations
  • (2)
  • Basepair signature
    Heat map statistics
    Min 0.31 | Avg 0.15 | Max 0.31
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.1068 s