Motif IL_87517.1 Version IL_87517.1 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 4-8 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8C3A_398 | 8C3A | 0.0000 | 0 | CM | SSU rRNA | U | 64 | A | 65 | U | 66 | A | 67 | A | 68 | G | 69 | * | U | 82 | G | 83 | A | 84 | A | 85 | A | 86 | cWW | tHS | cWW |
| 2 | IL_4V88_390 | 4V88 | 0.1799 | 0 | A6 | SSU rRNA | U | 64 | A | 65 | U | 66 | A | 67 | A | 68 | G | 69 | * | U | 82 | G | 83 | A | 84 | A | 85 | A | 86 | cWW | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAUAAG*UGAAA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUAA*GAA | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Heat map statistics
- Min 0.18 | Avg 0.09 | Max 0.18
Coloring options: