#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9break 10 11 12 13 14 15 161-162-159-10
1 IL_3U5F_0423U5F0.00001618S rRNAG751A752A753A754A755A756A757U758U759*A791U792A793U795A796G797C798cWWcWWcWW
2 IL_4BPP_0414BPP0.32051A18S RRNAG735A736A737A738A739A740A741U742U743*A774C775A776U778A779G780C781cWWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAAAAAAUU*AUAUUAGC1
GAAAAAAUU*ACAUUAGC1
Non-Watson-Crick part of the motif
SequenceCounts
AAAAAAU*UAUUAG1
AAAAAAU*CAUUAG1

Release history

Release1.51.61.71.81.91.101.111.121.131.141.15
Date2013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-292014-04-272014-06-20
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_90735.1Only in the parent motif
IL_82113.1
Compare
IL_3U5F_042IL_4BPP_041

Children motifs

Child motifCommon motif instancesOnly in IL_90735.1Only in the child motif
IL_90735.2
Compare
IL_3U5F_042, IL_4BPP_041IL_3J7A_033
Annotations
  • (2)
  • Basepair signature
    cWW-cWW-L-R-R-R-R-L-L-L-L-L-cWW
    Heat map statistics
    Min 0.32 | Avg 0.16 | Max 0.32
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