#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2break 3 41-42-3
1 IL_8VTW_0228VTW0.14644Multiple bulged bases (H)1A LSU rRNAG775A777*U787C791cWWcWW
2 IL_4WF9_0274WF90.11754Multiple bulged basesX LSU rRNAG820G822*C832C836cWWcWW
3 IL_7A0S_0217A0S0.00004Multiple bulged basesX LSU rRNAG788A790*U800C804cWWcWW
4 IL_5J7L_2655J7L0.09744Multiple bulged basesDA LSU rRNAG775G777*C787C791cWWcWW
5 IL_5TBW_0335TBW0.11474Multiple bulged bases1 LSU rRNAG907G909*U919C923cWWcWW
6 IL_8C3A_0368C3A0.14384Multiple bulged bases (H)1 LSU rRNAG903G905*U915C919cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGA*UAACC2
GGG*UAAUC2
GCG*CAAUC1
GGG*CAAUC1
Non-Watson-Crick part of the motif
SequenceCounts
G*AAU3
G*AAC2
C*AAU1

Release history

Release3.883.893.90
Date2024-09-112024-10-092024-11-06
StatusUpdated, 1 parentExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Multiple bulged bases (4)
  • Multiple bulged bases (H) (2)
  • Basepair signature
    cWW-cWW
    Heat map statistics
    Min 0.07 | Avg 0.11 | Max 0.16
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.664 s