Motif IL_91132.1 Version IL_91132.1 of this group appears in releases 0.9 to 1.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 3-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1S72_016 | 1S72 | 0.0000 | 2 | 0 | LSU rRNA | U | 548 | A | 551 | A | 552 | G | 553 | * | C | 606 | G | 607 | A | 608 | cWW | cWW | ||
| 2 | IL_3BNL_003 | 3BNL | 0.8797 | 0 | A+B | A site of bacterial ribosome | G | 15 | A | 16 | A | 17 | G | 18 | * | C | 6 | A | 7 | C | 8 | cWW | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UACAAG*CGA | 1 |
| GAAG*CAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACAA*G | 1 |
| AA*A | 1 |
Release history
| Release | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 |
|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_91132.1 | Only in the parent motif |
|---|---|---|---|
| IL_07911.1 Compare | IL_3BNL_003 | IL_1S72_016 | IL_3U5F_028, IL_3V2F_031, IL_2AW7_006, IL_3U5F_068 |
| IL_13942.1 Compare | IL_1S72_016 | IL_3BNL_003 |
Children motifs
| Child motif | Common motif instances | Only in IL_91132.1 | Only in the child motif |
|---|---|---|---|
| IL_19898.1 Compare | IL_3BNL_003 | IL_1S72_016 | IL_1LNG_001 |
| IL_01080.1 Compare | IL_1S72_016 | IL_3BNL_003 | IL_2PXV_001, IL_1FJG_057, IL_2AW7_068 |
- Annotations
- Basepair signature
- cWW-L-R-L-cWW
- Heat map statistics
- Min 0.88 | Avg 0.44 | Max 0.88
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