Motif IL_92422.1 Version IL_92422.1 of this group appears in releases 1.14 to 1.17
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 1-8 | 3-5 | 6-7 | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_4KR7_001 | 4KR7 | 0.0000 | 3 | M | RNA (39-MER) | U | 8 | A | 9 | G | 10 | U | 13 | C | 15 | U | 16 | * | A | 27 | G | 28 | cWW | ncWW | cWW |
2 | IL_4KR7_002 | 4KR7 | 0.7146 | 3 | X | RNA (39-MER) | U | 8 | A | 9 | G | 10 | G | 12 | C | 15 | U | 16 | * | A | 27 | G | 28 | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UAGUGUCCU*AG | 2 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AGUGUCC* | 2 |
Release history
Release | 1.14 | 1.15 | 1.17 |
---|---|---|---|
Date | 2014-04-27 | 2014-06-20 | 2014-09-04 |
Status | New id, no parents | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
Child motif | Common motif instances | Only in IL_92422.1 | Only in the child motif |
---|---|---|---|
IL_68139.1 Compare | IL_4KR7_001 | IL_4KR7_002 | IL_2OZB_001, IL_3U5H_046 |
IL_39044.1 Compare | IL_4KR7_002 | IL_4KR7_001 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-L-L-L-cWW
- Heat map statistics
- Min 0.71 | Avg 0.36 | Max 0.71
Coloring options: