Motif IL_93889.1 Version IL_93889.1 of this group appears in releases 3.88 to 3.89
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | break | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 1-21 | 2-20 | 3-19 | 4-17 | 10-13 | 11-12 | 18-19 | |||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_4MGN_005 | 4MGN | 0.0000 | 0 | A | glyQS T box riboswitch | U | 81 | G | 82 | A | 83 | A | 84 | A | 85 | C | 86 | G | 87 | G | 88 | C | 89 | A | 90 | G | 91 | * | U | 14 | C | 15 | A | 16 | A | 17 | U | 18 | A | 19 | G | 20 | U | 21 | A | 22 | G | 23 | ncWW | tSH | ntHW | ntHH | ncBW | cWW | cSH |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGAAACGGCAG*UCAAUAGUAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GAAACGGCA*CAAUAGUA | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-R-tSH-L-cSH-L-L-R-L-R-L-R-L-R-L-R-L-L
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: