Motif IL_96182.1 Version IL_96182.1 of this group appears in releases 1.5 to 1.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-8 | 3-4 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1X8W_005 | 1X8W | 0 | 1 | A | Group I catalytic intron | G | 134 | U | 135 | A | 136 | * | U | 182 | A | 183 | A | 184 | A | 186 | A | 187 | G | 188 | C | 189 | cWW | cWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUA*UAAUAAGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| U*AAUAAG | 1 |
Release history
| Release | 1.5 |
|---|---|
| Date | 2013-08-03 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_96182.1 | Only in the parent motif |
|---|---|---|---|
| IL_06390.3 Compare | IL_1X8W_005 | IL_420D_002, IL_420D_001, IL_2AW7_011, IL_1GID_006, IL_3V2F_025, IL_406D_002, IL_3U5F_044, IL_3R1D_002, IL_1GID_013, IL_3W3S_003, IL_3U5F_023, IL_3U5F_022, IL_3NJ7_001, IL_4E5C_001, IL_4IOA_029, IL_3U5H_072, IL_3U5F_070, IL_3SJ2_002, IL_3SJ2_003, IL_3SJ2_001, IL_3U5H_151, IL_3CZW_002, IL_3CZW_001, IL_2R22_001, IL_2XXA_011 |
Children motifs
| Child motif | Common motif instances | Only in IL_96182.1 | Only in the child motif |
|---|---|---|---|
| IL_35043.1 Compare | IL_1X8W_005 | IL_1GID_006, IL_1GID_013 |
- Annotations
-
- (1)
- Basepair signature
- cWW-R-cWH-R-R-R-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
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