Motif IL_96920.1 Version IL_96920.1 of this group appears in releases 1.14 to 1.15
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 1-3 | 1-7 | 2-6 | 4-7 | 5-6 | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_4BPP_023 | 4BPP | 0 | 0 | A | 18S RRNA | C | 435 | C | 436 | A | 437 | A | 438 | U | 439 | * | A | 452 | G | 453 | cSH | cWW | tWH | cWS | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CCAAU*AG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
CAA* | 1 |
Release history
Parent motifs
Parent motif | Common motif instances | Only in IL_96920.1 | Only in the parent motif |
---|---|---|---|
IL_98421.4 Compare | IL_4BPP_023 | IL_1FJG_013, IL_2AW7_016 |
Children motifs
Child motif | Common motif instances | Only in IL_96920.1 | Only in the child motif |
---|---|---|---|
IL_73276.8 Compare | IL_4BPP_023 | IL_4A1C_005, IL_4CUV_045, IL_1VW3_027, IL_2AW7_018, IL_1FJG_047, IL_4QCN_047, IL_4CUX_024, IL_2QBG_102, IL_3U5F_060, IL_1VX2_053, IL_4QCN_101, IL_1VW3_085, IL_1VX6_047, IL_4MGN_003, IL_4BPP_057, IL_4IOA_049, IL_3U5H_042, IL_1S72_091, IL_1FJG_015, IL_2QBG_033, IL_1VX2_023, IL_4A1B_046, IL_1VWW_094, IL_1S72_051, IL_2QBG_050, IL_4IOA_097, IL_3J7A_053, IL_4JRC_003 |
- Annotations
-
- (1)
- Basepair signature
- cWW-cSH-tWH-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: