#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 71-31-72-64-75-6
1 IL_4BPP_0234BPP00A18S RRNAC435C436A437A438U439*A452G453cSHcWWtWHcWScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CCAAU*AG1
Non-Watson-Crick part of the motif
SequenceCounts
CAA*1

Release history

Release1.141.15
Date2014-04-272014-06-20
StatusNew id, 1 parentExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_96920.1Only in the parent motif
IL_98421.4
Compare
IL_4BPP_023IL_1FJG_013, IL_2AW7_016

Children motifs

Child motifCommon motif instancesOnly in IL_96920.1Only in the child motif
IL_73276.8
Compare
IL_4BPP_023IL_4A1C_005, IL_4CUV_045, IL_1VW3_027, IL_2AW7_018, IL_1FJG_047, IL_4QCN_047, IL_4CUX_024, IL_2QBG_102, IL_3U5F_060, IL_1VX2_053, IL_4QCN_101, IL_1VW3_085, IL_1VX6_047, IL_4MGN_003, IL_4BPP_057, IL_4IOA_049, IL_3U5H_042, IL_1S72_091, IL_1FJG_015, IL_2QBG_033, IL_1VX2_023, IL_4A1B_046, IL_1VWW_094, IL_1S72_051, IL_2QBG_050, IL_4IOA_097, IL_3J7A_053, IL_4JRC_003
Annotations
  • (1)
  • Basepair signature
    cWW-cSH-tWH-L-cWW
    Heat map statistics
    Min 0.00 | Avg 0.00 | Max 0.00
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