Motif J3_11018.1 Version J3_11018.1 of this group appears in releases 4.0 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 1-10 | 2-3 | 2-9 | 6-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_4LFB_017 | 4LFB | 0.0000 | 0 | A | SSU rRNA | U | 1073 | G | 1074 | * | U | 1083 | G | 1084 | U | 1085 | U | 1086 | * | G | 1099 | C | 1100 | A | 1101 | A | 1102 | cWW | cWW | tsS | cWWa |
| 2 | J3_8B0X_030 | 8B0X | 0.0989 | 0 | A | SSU rRNA | U | 1073 | G | 1074 | * | U | 1083 | G | 1084 | U | 1085 | U | 1086 | * | G | 1099 | C | 1100 | A | 1101 | A | 1102 | cWW | cWW | tsS | ncWWa |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UG*UGUU*GCAA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *GU*CA | 2 |
Release history
| Release | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 |
|---|---|---|---|---|---|---|---|---|
| Date | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-tSS-F-F-cWW-F
- Heat map statistics
- Min 0.10 | Avg 0.05 | Max 0.10
Coloring options: