Motif J3_11018.1 Version J3_11018.1 of this group appears in releases 4.0 to 4.3
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 1-10 | 2-3 | 2-9 | 6-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8B0X_030 | 8B0X | 0.0000 | 0 | A | SSU rRNA | U | 1073 | G | 1074 | * | U | 1083 | G | 1084 | U | 1085 | U | 1086 | * | G | 1099 | C | 1100 | A | 1101 | A | 1102 | cWW | cWW | tsS | ncWWa |
| 2 | J3_4LFB_017 | 4LFB | 0.0989 | 0 | A | SSU rRNA | U | 1073 | G | 1074 | * | U | 1083 | G | 1084 | U | 1085 | U | 1086 | * | G | 1099 | C | 1100 | A | 1101 | A | 1102 | cWW | cWW | tsS | cWWa |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UG*UGUU*GCAA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *GU*CA | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-tSS-F-F-cWW-F
- Heat map statistics
- Min 0.10 | Avg 0.05 | Max 0.10
Coloring options: