Motif J3_11375.3 Version J3_11375.3 of this group appears in releases 4.0 to 4.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 1-10 | 2-3 | 8-9 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_4UYK_002 | 4UYK | 0.0000 | 0 | R | SRP RNA | C | 16 | G | 17 | * | U | 35 | G | 36 | U | 37 | A | 38 | A | 39 | C | 40 | * | G | 61 | G | 62 | cWW | cWW | cWW |
| 2 | J3_5AOX_001 | 5AOX | 0.3720 | 0 | C | ALU JO CONSENSUS RNA | C | 4 | G | 5 | * | U | 24 | G | 25 | U | 26 | A | 27 | A | 28 | U | 29 | * | A | 44 | G | 45 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CG*UGUAAC*GG | 1 |
| CG*UGUAAU*AG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *GUAA* | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-cWW-F-F-F-F
- Heat map statistics
- Min 0.37 | Avg 0.19 | Max 0.37
Coloring options: