Motif J3_23622.1 Version J3_23622.1 of this group appears in releases 3.80 to 3.89
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 1-12 | 2-7 | 3-4 | 5-6 | 8-11 | 9-10 | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | J3_8C3A_037 | 8C3A | 0.0000 | 1 | CM | SSU rRNA | U | 1064 | U | 1065 | A | 1066 | C | 1067 | G | 1068 | * | C | 1075 | A | 1076 | A | 1077 | G | 1079 | * | C | 1022 | U | 1023 | A | 1024 | cWW | tWW | ncSW | cWW | tWW | cWW |
2 | J3_4V88_034 | 4V88 | 0.0914 | 1 | A6 | SSU rRNA | U | 1079 | U | 1080 | A | 1081 | C | 1082 | G | 1083 | * | C | 1090 | A | 1091 | A | 1092 | G | 1094 | * | C | 1037 | U | 1038 | A | 1039 | cWW | ntWW | ncSH | cWW | tWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CUA*UUACG*CAAAG | 2 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
U*UAC*AAA | 2 |
Release history
Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 |
---|---|---|---|---|---|---|---|---|---|---|
Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tWW-tWW-F-cWW-F-cWW
- Heat map statistics
- Min 0.09 | Avg 0.05 | Max 0.09
Coloring options: