Motif J3_42762.1 Version J3_42762.1 of this group appears in releases 3.88 to 3.90
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 1-13 | 2-12 | 5-8 | 6-7 | 10-11 | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | J3_5TBW_069 | 5TBW | 0.0000 | 1 | 1 | LSU rRNA | A | 3314 | G | 3315 | A | 3316 | U | 3317 | G | 3318 | A | 3320 | * | U | 3387 | C | 3388 | U | 3389 | G | 3390 | * | C | 3298 | A | 3299 | U | 3300 | cWW | cWW | ncWW | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CAU*AGAUGUA*UCUG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
A*GAUGU*CU | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-F-cWW-F-F-F-cWW-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: