Motif J3_69466.1 Version J3_69466.1 of this group appears in releases 3.91 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | break | 18 | 19 | 20 | 21 | 22 | 23 | 24 | break | 25 | 26 | 27 | 1-27 | 2-26 | 16-18 | 17-18 | 24-25 | |||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8P9A_070 | 8P9A | 0.0000 | 1 | sR | SSU rRNA | A | 213 | G | 214 | A | 215 | U | 216 | A | 217 | A | 218 | A | 219 | A | 220 | A | 221 | A | 222 | U | 223 | C | 224 | A | 225 | A | 226 | U | 227 | G | 228 | U | 229 | * | A | 236 | C | 237 | U | 238 | C | 239 | U | 241 | U | 242 | G | 243 | * | C | 250 | A | 251 | U | 252 | cWW | tSH | ncWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGAUAAAAAAUCAAUGU*ACUCUUUG*CAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAUAAAAAAUCAAUG*CUCUUU*A | 1 |
Release history
| Release | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tSH-F-cWW-F-F-F-F-F-F-F-F-F-F-F-F-cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: