Motif J3_73940.1 Version J3_73940.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | break | 13 | 14 | 15 | 16 | 1-16 | 2-15 | 6-11 | 7-10 | 8-9 | 12-13 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8P9A_060 | 8P9A | 0.0000 | 9 | AR | LSU rRNA | A | 2547 | C | 2548 | G | 2555 | C | 2556 | A | 2557 | A | 2561 | A | 2562 | G | 2563 | * | U | 2578 | G | 2579 | A | 2580 | U | 2581 | * | A | 2529 | G | 2530 | C | 2531 | U | 2532 | cWW | ncWB | tHH | tHS | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGCU*ACGUUCUAGCAUUCAAG*UGAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GC*CGUUCUAGCAUUCAA*GA | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-tHH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: