Motif J3_78095.1 Version J3_78095.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | break | 15 | 16 | 17 | break | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 1-28 | 2-27 | 5-19 | 6-24 | 7-13 | 8-23 | 11-23 | 13-21 | 14-15 | 17-18 | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_7V9E_003 | 7V9E | 0.0000 | 1 | A | RNA (68-MER) | G | 33 | A | 34 | C | 35 | A | 36 | A | 37 | C | 38 | A | 40 | G | 41 | A | 42 | C | 43 | A | 44 | U | 45 | A | 46 | C | 47 | * | G | 62 | 1MA | 63 | G | 64 | * | C | 6 | U | 7 | G | 8 | A | 9 | C | 10 | C | 11 | G | 12 | A | 13 | C | 14 | C | 15 | C | 16 | cWW | ncWWa | tHW | cWW | tSW | cWW | cWS | cSW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGACCGACCC*GACAACUAGACAUAC*G(1MA)G | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGACCGACC*ACAACUAGACAUA*(1MA) | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-F-F-tHW-cWW-cWS-cWW-tSW-F-cSW-F-F-F-cWW-F-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: