#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 7break 8 9 101-104-57-8
1 J3_4V88_0404V880.00001A6 SSU rRNAG1386G1387A1388C1389*G1412U1413U1415*A1336A1337C1338cWWcWWcWW
2 J3_5J7L_0105J7L0.24611AA SSU rRNAA1155G1156A1157C1158*G1181G1182G1184*U1116A1117U1118cWWcWWcWW
3 J3_4LFB_0084LFB0.24721A SSU rRNAG1155G1156A1157C1158*G1181G1182G1184*C1116G1117C1118cWWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AAC*GGAC*GUUU1
UAU*AGAC*GGUG1
CGC*GGAC*GGAG1
Non-Watson-Crick part of the motif
SequenceCounts
A*GA*UU1
A*GA*GU1
G*GA*GA1

Release history

Release3.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.79
Date2018-02-092018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-03
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-F-F-F-cWW-cWW-F
    Heat map statistics
    Min 0.16 | Avg 0.15 | Max 0.25
    Help

    Coloring options:

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