Motif J3_84625.2 Version J3_84625.2 of this group appears in releases 3.54 to 3.86
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | break | 12 | 13 | 1-2 | 1-13 | 5-8 | 6-7 | 11-12 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_5J7L_037 | 5J7L | 0.0000 | 1 | DA | LSU rRNA | G | 70 | A | 71 | U | 72 | A | 73 | G | 75 | C | 76 | * | G | 110 | A | 111 | U | 112 | U | 113 | U | 114 | * | A | 56 | C | 57 | ncSs | cWW | cWW | cWW | cWW |
| 2 | J3_7RQB_002 | 7RQB | 0.0995 | 1 | 1A | LSU rRNA | G | 70 | A | 71 | U | 72 | A | 73 | G | 75 | C | 76 | * | G | 110 | A | 111 | U | 112 | G | 113 | U | 114 | * | A | 56 | C | 57 | ncSs | cWW | cWW | cWW | cWW |
| 3 | J3_7A0S_002 | 7A0S | 0.1720 | 1 | X | LSU rRNA | G | 69 | A | 70 | A | 71 | A | 72 | G | 74 | C | 75 | * | G | 108 | A | 109 | U | 110 | G | 111 | U | 112 | * | A | 55 | C | 56 | cWW | ncWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AC*GAUAAGC*GAUUU | 1 |
| AC*GAUAAGC*GAUGU | 1 |
| AC*GAAAAGC*GAUGU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AUAAG*AUU | 1 |
| *AUAAG*AUG | 1 |
| *AAAAG*AUG | 1 |
Release history
| Release | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-F-cWW-F-F-F-cWW-F-cWW
- Heat map statistics
- Min 0.10 | Avg 0.10 | Max 0.17
Coloring options: