Motif J3_90186.1 Version J3_90186.1 of this group appears in releases 3.98 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | break | 18 | 19 | 20 | 1-20 | 2-7 | 4-15 | 5-6 | 17-18 | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_9E7E_002 | 9E7E | 0.0000 | 2 | C | Rev Response Element SLII A31C/G39C | U | 8 | G | 9 | G | 11 | C | 12 | G | 13 | * | C | 31 | C | 32 | G | 33 | G | 34 | U | 35 | A | 36 | C | 37 | A | 38 | C | 39 | G | 40 | C | 41 | C | 42 | * | G | 62 | A | 63 | A | 65 | cWW | cWW | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGGGCG*CCGGUACACGCC*GAUA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGGC*CGGUACACGC*AU | 1 |
Release history
| Release | 3.98 | 3.99 | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-06-18 | 2025-07-16 | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-F-F-cWW-cWW-cWW-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: